Read-only biomedical evidence tools for drug-target validation: DepMap, gnomAD, OpenTargets, PubMed…
Connect Runs on your machine
claude mcp add agentic-target-evidence -e MCP_TRANSPORT=<MCP_TRANSPORT> -e NCBI_API_KEY=<NCBI_API_KEY> -e USPTO_API_KEY=<USPTO_API_KEY> -- docker run -i --rm ghcr.io/athril/agentic-target-evidence/mcp-gateway:v0.1.5
{
"mcpServers": {
"agentic-target-evidence": {
"command": "docker",
"args": [
"run",
"-i",
"--rm",
"ghcr.io/athril/agentic-target-evidence/mcp-gateway:v0.1.5"
],
"env": {
"MCP_TRANSPORT": "<MCP_TRANSPORT>",
"NCBI_API_KEY": "<NCBI_API_KEY>",
"USPTO_API_KEY": "<USPTO_API_KEY>"
}
}
}
}
{
"mcpServers": {
"agentic-target-evidence": {
"command": "docker",
"args": [
"run",
"-i",
"--rm",
"ghcr.io/athril/agentic-target-evidence/mcp-gateway:v0.1.5"
],
"env": {
"MCP_TRANSPORT": "<MCP_TRANSPORT>",
"NCBI_API_KEY": "<NCBI_API_KEY>",
"USPTO_API_KEY": "<USPTO_API_KEY>"
}
}
}
}
{
"servers": {
"agentic-target-evidence": {
"type": "stdio",
"command": "docker",
"args": [
"run",
"-i",
"--rm",
"ghcr.io/athril/agentic-target-evidence/mcp-gateway:v0.1.5"
],
"env": {
"MCP_TRANSPORT": "<MCP_TRANSPORT>",
"NCBI_API_KEY": "<NCBI_API_KEY>",
"USPTO_API_KEY": "<USPTO_API_KEY>"
}
}
}
}
Replace the values in angle brackets with your own. Keys stay on your machine; we never see them.
Tools
This server runs locally, so its tools are listed by your MCP client once it starts.
Environment variables
| Name | Description |
|---|---|
MCP_TRANSPORTOptional | Run the gateway over stdio (the image defaults to HTTP). |
NCBI_API_KEYOptional, secret | Optional NCBI E-utilities key; raises the PubMed/ClinVar rate limit from 3 to 10 req/s. |
USPTO_API_KEYOptional, secret | Optional USPTO Open Data Portal key; the USPTO patent tools return nothing without it. |
Details
| Package | ghcr.io/athril/agentic-target-evidence/mcp-gateway:v0.1.5 (OCI, stdio) |
| First published | 31 Oct 2026 |
| Last updated | 5 Nov 2026 |
| Registry name | io.github.athril/agentic-target-evidence |
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