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BioHarbor

io.github.danielLuo2/bioharbor ยท v0.1.6

Run real bioinformatics from your AI agent. Reliable, reproducible, on your own GPUs.

Connect Runs on your machine

Terminal
claude mcp add bioharbor -- uvx bioharbor==0.1.6
claude_desktop_config.json
{
  "mcpServers": {
    "bioharbor": {
      "command": "uvx",
      "args": [
        "bioharbor==0.1.6"
      ]
    }
  }
}
~/.cursor/mcp.json
{
  "mcpServers": {
    "bioharbor": {
      "command": "uvx",
      "args": [
        "bioharbor==0.1.6"
      ]
    }
  }
}
.vscode/mcp.json
{
  "servers": {
    "bioharbor": {
      "type": "stdio",
      "command": "uvx",
      "args": [
        "bioharbor==0.1.6"
      ]
    }
  }
}

Tools

This server runs locally, so its tools are listed by your MCP client once it starts.

Details

Package[email protected] (PYPI, stdio)
First published10 Oct 2026
Last updated10 Oct 2026
Registry nameio.github.danielLuo2/bioharbor

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