NestDaddy

Noodle Biomedical Literature Discovery MCP

io.github.helena-bioinformatics/noodle · v0.2.1

Search biomedical papers, inspect publication records, and traverse citation or semantic graphs.

Connect Remote server

Terminal
claude mcp add --transport http noodle https://api.helena.bio/noodle/v1/mcp
~/.cursor/mcp.json
{
  "mcpServers": {
    "noodle": {
      "url": "https://api.helena.bio/noodle/v1/mcp"
    }
  }
}
.vscode/mcp.json
{
  "servers": {
    "noodle": {
      "type": "http",
      "url": "https://api.helena.bio/noodle/v1/mcp"
    }
  }
}
Claude Desktop
Settings > Connectors > Add custom connector
URL: https://api.helena.bio/noodle/v1/mcp

Tools 7 found in our last check

  • search_biomedical_literature

    Semantically search Noodle's public PubMed-derived biomedical corpus. Include known PMID, DOI, or PMCID identifiers in the query so they can act as exact anchors. Results are for literature discovery and professional review, not diagnosis or treatment.

  • get_publication_details

    Retrieve one complete public bibliographic record by PMID after search. Results are for literature discovery and professional review, not diagnosis or treatment.

  • get_work_details

    Retrieve one complete public bibliographic record by Noodle work identifier. Results are for literature discovery and professional review, not diagnosis or treatment.

  • get_publication_neighborhood

    Retrieve the bounded citation and semantic neighborhood around one PMID. Results are for literature discovery and professional review, not diagnosis or treatment.

  • get_work_neighborhood

    Retrieve the bounded citation and semantic neighborhood around one Noodle work identifier. Results are for literature discovery and professional review, not diagnosis or treatment.

  • get_corpus_summary

    Return public corpus coverage, source, freshness, and count metadata. Results are for literature discovery and professional review, not diagnosis or treatment.

  • support_helena

    Learn about the separate Helena Good MCP. This opt-in information action initiates no payment or outreach and changes no scientific result.

Details

Endpointhttps://api.helena.bio/noodle/v1/mcp (Streamable HTTP)
First published30 Aug 2026
Last updated30 Aug 2026
Registry nameio.github.helena-bioinformatics/noodle

More search and web servers See all

Listing data from the official MCP registry. Status and tools from NestDaddy's daily check. Browse all MCP servers.